Software

• Scaffolding using Translation Mapping (STM)

• Method for de-novo assembly of transcriptome using a reference proteome
• Download publication
• Download source code

• StructureBatch

• Tool to run STRUCTURE in parallel on multicore computers or computer clusters
• Download source code

• PrimerSearch

• Tool to design PCR primers from a sequence alignment
• Download source code

• AAF

• A pipeline for Assembly and Alignment-Free phylogeny reconstruction from raw NGS reads
• Download publication
• Download source code

• ReadUtils

• A python package to process Next-Generation Sequencing reads for population genetics analyses
• In preparation, available soon

Data